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PostPosted: Mon Jul 17, 2017 9:12 am 
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Joined: Fri Jul 14, 2017 10:03 pm
Posts: 1
Hi all,

I am new to Docking and AutoDock. I am performing an experiment with a protein and a lipopeptide as its ligand. But, the binding energy is always positive and high. The receptor has no defined interaction site with the ligand and I have assigned the docking site based on its interaction with other ligands from literature. Can anyone suggest me what is wrong here? Any kind of help is appreciated.

Regards,
B Manna


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