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Docking parameters
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Author:  alesanchezmar [ Sun Nov 13, 2016 5:27 pm ]
Post subject:  Docking parameters

What is the differences between Genetic algorithm, Stimulated annealing, local search?

Author:  tatiana [ Thu Feb 16, 2017 9:00 pm ]
Post subject:  Re: Docking parameters

alesanchezmar wrote:
What is the differences between Genetic algorithm, Stimulated annealing, local search?

Hi dear users,
I am struggling to dock this ligand Na2B4O7 into autodock. This is the message I am receiving ``Unknown ligand atom type B, add parameters for it to the parameter library list first``. I used notepad to open the pdbqt file of the ligand and play around with some parameters of the boron atom but it is not working since I neither know which parameter to change nor which new value to enter.
Any help will be more than welcome?
Eager to hear from you

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