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PostPosted: Mon May 25, 2015 8:43 am 
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Hello,

I would like to know if we can compare the docking results from using two different Autogrid parameters for two related proteins?

Meaning for one protein, one Autogrid parameter works and for another related one, this same Autogrid parameter does not work because binding sites are positioned differently, so have to use another Autogrid parameter.

Kindly let me know as this is essential to the work I am doing, and I want to dock these two proteins with same ligand.

Thanks.


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PostPosted: Mon Jun 01, 2015 7:45 am 
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Any advice? Ideas?


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