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PostPosted: Fri Mar 18, 2011 4:38 pm 
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Joined: Fri Mar 18, 2011 4:33 pm
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Hi all.
Actually I wanted to understand how RMSD is calculated in AutoDock considering symmetry into account? Actually I found that Kabsch algorithm is usually employed for RMSD calculation but isn't that for one-to-one correspondence? If one wants to take symmetry into account for RMSD calculation then what algorithm one can use? Sorry if this is not the right place to ask this question.

Thanks in anticipation.


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PostPosted: Mon Feb 02, 2015 11:29 am 
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Hi abc,

if you got the solution regarding to your question, can you please post here. (me too curious to have answer for this question).


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