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Hi, I am interested in the evaluation of Xtal receptor-ligand interaction with autodock4 without any docking calculation. I found the command "epdb", but I think it is not well documented. I used it in a *.dpf file: epdb complex.pdb move ligand.pdbqt ---- It is not clear to me whether the pdb file should be the receptor-ligand "complex.pdb", or the receptor.pdb, or even in the pdb or pdbqt format. What about "move" file? should I separate ligand.pdb from the complex.pdb? in which format? Any other previous calculations? Probably I am completely wrong! Can anyone help me?
Thanks a lot Gregorio
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