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AutoDock, AutoLigand, MGLTools, Vina, PyRx and more.
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PostPosted: Tue Dec 15, 2009 12:19 pm 
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Joined: Tue Dec 15, 2009 11:40 am
Posts: 1
Hi,

I use pymol to visualize my ligands and receptor.

When I have gone to visualize my results from a AutoDock run in a pdbqt file, the ligand has gone from a stick form to a matrix/grid like appearance, please see attachment.

Why has this happened? and is there away to get the ligands appearance back to stick form appearance?

Kind regards,

Donna


Attachments:
compound.png
compound.png [ 112.78 KiB | Viewed 2905 times ]
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