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PostPosted: Tue Nov 20, 2012 12:17 pm 
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Millimolar User
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Joined: Mon Nov 19, 2012 11:55 am
Posts: 3
Dear user,

I want to dock a ligand with a macromolecule, I have made both PDBs of ligand and receptor, and also made .pdbqt for macromolecules but failed to create ligand's .pdbqt file. I am attaching the PDB file of ligand, please suggest me where I was wrong.

thanks and regards,
Souvik


Attachments:
HOE.pdb [2.57 KiB]
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PostPosted: Mon Dec 10, 2012 6:35 am 
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Micromolar User
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Joined: Fri Sep 21, 2012 3:25 am
Posts: 40
Location: Mexico
Hi there,

I don't know why you failed. I ran ADT and successfully generated the ligand. I suggest you try again.


Attachments:
File comment: Ligand in PDBQT format
HOE.pdbqt [2.68 KiB]
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