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PostPosted: Thu Mar 27, 2014 2:38 am 
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Joined: Fri Mar 21, 2014 8:59 am
Posts: 2
Dear everyone,

I am trying to build Vina from the source code in my PC (CentOS 6.5 with BOOST 1.41).

I following the instructions in the web site but encountering some problems:

The Boost Libraries was installed in /usr/include/boost

so I modified the Makefile in /Program/autodock_vina_1_1_2/build/linux/release to :

---------------------------------------------------------------------------------
BASE=/usr/local
BOOST_VERSION=1_41
BOOST_INCLUDE = /usr/include/boost
C_PLATFORM=-static -pthread
GPP=/usr/bin/g++
C_OPTIONS= -O3 -DNDEBUG
BOOST_LIB_VERSION=

include ../../makefile_common

----------------------------------------------------------------------------------

However, when I type make depend, there so many errors:

ln -sf `/usr/bin/g++ -print-file-name=libstdc++.a`
rm -f dependencies_tmp dependencies_tmp.bak
touch dependencies_tmp
makedepend -f dependencies_tmp -Y -I ../../../src/lib ../../../src/lib/*.cpp ../../../src/tests/*.cpp ../../../src/design/*.cpp ../../../src/main/*.cpp ../../../src/split/*.cpp ../../../src/tune/*.cpp
makedepend: warning: ../../../src/lib/cache.cpp, line 23: cannot find include file "algorithm"
not in ../../../src/lib/algorithm
makedepend: warning: ../../../src/lib/cache.cpp, line 32: cannot find include file "boost/archive/text_oarchive.hpp"
not in ../../../src/lib/boost/archive/text_oarchive.hpp
makedepend: warning: ../../../src/lib/cache.cpp, line 33: cannot find include file "boost/archive/text_iarchive.hpp"
not in ../../../src/lib/boost/archive/text_iarchive.hpp
makedepend: warning: ../../../src/lib/cache.cpp, line 38: cannot find include file "boost/serialization/split_member.hpp"
not in ../../../src/lib/boost/serialization/split_member.hpp
makedepend: warning: ../../../src/lib/cache.cpp, line 39: cannot find include file "boost/filesystem/fstream.hpp"
not in ../../../src/lib/boost/filesystem/fstream.hpp
makedepend: warning: ../../../src/lib/cache.cpp, line 40: cannot find include file "boost/static_assert.hpp"
not in ../../../src/lib/boost/static_assert.hpp
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/cache.h, line 26): cannot find include file "string"
not in ../../../src/lib/string
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 26): cannot find include file "cassert"
not in ../../../src/lib/cassert
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 27): cannot find include file "string"
not in ../../../src/lib/string
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 28): cannot find include file "limits"
not in ../../../src/lib/limits
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 29): cannot find include file "utility"
not in ../../../src/lib/utility
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 30): cannot find include file "algorithm"
not in ../../../src/lib/algorithm
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 31): cannot find include file "vector"
not in ../../../src/lib/vector
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 32): cannot find include file "cmath"
not in ../../../src/lib/cmath
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 33): cannot find include file "iostream"
not in ../../../src/lib/iostream
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 34): cannot find include file "fstream"
not in ../../../src/lib/fstream
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 35): cannot find include file "iomanip"
not in ../../../src/lib/iomanip
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 36): cannot find include file "sstream"
not in ../../../src/lib/sstream
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 37): cannot find include file "string"
not in ../../../src/lib/string
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 39): cannot find include file "boost/serialization/vector.hpp"
not in ../../../src/lib/boost/serialization/vector.hpp
makedepend: warning: ../../../src/lib/cache.cpp (reading ../../../src/lib/common.h, line 40): cannot find include file "boost/serialization/base_object.hpp"



Could you please tell me what mistake I have made?

Thank you so much for help!!


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