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PostPosted: Sat Oct 03, 2015 11:16 pm 
Millimolar User
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Joined: Sat Oct 03, 2015 9:55 pm
Posts: 1
I tried deleting hydrogens from a .pdb file and it displayed this error.

Python 2.5.6 (r256:88840, Nov 6 2012, 15:29:26)
[GCC 4.1.2 20061115 (prerelease) (Debian 4.1.1-21)] on linux2
Type "copyright", "credits" or "license()" for more information.

Personal firewall software may warn about the connection IDLE
makes to its subprocess using this computer's internal loopback
interface. This connection is not visible on any external
interface and no data is sent to or received from the Internet.

IDLE 1.2.6 ==== No Subprocess ====
>>> ERROR *********************************************
Traceback (most recent call last):
File "/home/aroinverdera/autodocktools/MGLToolsPckgs/ViewerFramework/", line 898, in tryto
result = command( *args, **kw )
File "/home/aroinverdera/autodocktools/MGLToolsPckgs/Pmv/", line 485, in doit
File "/home/aroinverdera/autodocktools/MGLToolsPckgs/ViewerFramework/", line 537, in dispatchEvent
File "/home/aroinverdera/autodocktools/MGLToolsPckgs/Pmv/", line 577, in handleDeleteAtomsEvents
if parents[0]==None: break
File "/home/aroinverdera/autodocktools/lib/python2.5/", line 28, in __getitem__
def __getitem__(self, i): return[i]
IndexError: list index out of range

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