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 Post subject: Complex visualisation
PostPosted: Thu Jul 16, 2009 1:56 pm 
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I've created a complex with 10 docked conformations from VINA using the instructions given in
http://autodock.scripps.edu/faqs-help/f ... n-autodock

When I read the complex in AutoDockTools, PMV shows only the ligand but not the macromolecule. I'm attaching the complex.pdb file for easy reference.

Any suggestions regarding how to solve this problem would be most welcome.

Thanks in advance

George


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2erbA_complex.pdb [122.55 KiB]
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PostPosted: Thu Jul 16, 2009 9:59 pm 
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Thanks for the message. I fixed this in our CVS. Please locate MolKit/pdbParser.py under MGLToolsPckgs folder and replace it with the attached file to fix this problem. Thanks!


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File comment: Updated parser from CVS
pdbParser.py [85.43 KiB]
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