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I am not able to choose ligand (mol2) file
http://mgl.scripps.edu/forum/viewtopic.php?f=11&t=2591
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Author:  yugandhar1786 [ Fri Feb 07, 2014 2:20 pm ]
Post subject:  I am not able to choose ligand (mol2) file

An error is popping up when I try to choose the loaded mol2 file as ligand. I am quite novice in here. someone please help me out.
IDLE 1.2.6 ==== No Subprocess ====
>>> Exception in Tkinter callback
Traceback (most recent call last):
File "/Users/yugandhar/autodocktool/mgltools_i86Darwin9_1.5.6/lib/python2.5/lib-tk/Tkinter.py", line 1414, in __call__
return self.func(*args)
File "/Users/yugandhar/autodocktool/mgltools_i86Darwin9_1.5.6/MGLToolsPckgs/AutoDockTools/autotorsCommands.py", line 810, in chooseLigand_cb
mols = self.chooser.getMolSet()
File "/Users/yugandhar/autodocktool/mgltools_i86Darwin9_1.5.6/MGLToolsPckgs/Pmv/guiTools.py", line 178, in getMolSet
if self.mode=='single': return mols[0]
File "/Users/yugandhar/autodocktool/mgltools_i86Darwin9_1.5.6/lib/python2.5/UserList.py", line 28, in __getitem__
def __getitem__(self, i): return self.data[i]
IndexError: list index out of range

Author:  Ruth Huey [ Tue Feb 18, 2014 6:37 pm ]
Post subject:  Re: I am not able to choose ligand (mol2) file

This error message signals that there may be a problem with the mol2 file you are trying to use.
If you would like to post your mol2 file, we might be able to find the problem.

Author:  Gaju8055 [ Tue Aug 30, 2016 8:15 am ]
Post subject:  Re: I am not able to choose ligand (mol2) file

GRID
SET MAP TYPES
CHOOSE LIGAND

Exception in Tkinter callback
Traceback (most recent call last):
File "C:\Program Files\MGLTools-latest\lib\lib-tk\Tkinter.py", line 1410, in __call__
return self.func(*args)
File "C:\Program Files\MGLTools-latest\lib\site-packages\AutoDockTools\autogpfCommands.py", line 4621, in chooseLigand_cb
mol = self.chooser.getMolSet()
File "C:\Program Files\MGLTools-latest\lib\site-packages\Pmv\guiTools.py", line 181, in getMolSet
if self.mode=='single': return mols[0]
File "C:\Program Files\MGLTools-latest\lib\UserList.py", line 31, in __getitem__
def __getitem__(self, i): return self.data[i]
IndexError: list index out of range
KINDLY HELP

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1.pdb [3.4 KiB]
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