The Molecular Graphics Laboratory Forum

Hi,

Whenever I try and get to the compute molecular surface pop-up menu to select "per molecule" I get errors (posted below). I was following the tutorial and tried to compute the molecular surface for 2ezd but it is treating the peptide and nucleic acid as one surface. I followed instructions to get to the MSMS menu so I can click "per molecule", but the menu never comes up and I get errors. Any ideas?


Python 2.5.5 (r255:77872, Aug 20 2010, 13:31:19)
[GCC 4.0.1 (Apple Inc. build 5465)] on darwin
Type "copyright", "credits" or "license()" for more information.

****************************************************************
Personal firewall software may warn about the connection IDLE
makes to its subprocess using this computer's internal loopback
interface. This connection is not visible on any external
interface and no data is sent to or received from the Internet.
****************************************************************

IDLE 1.2.5 ==== No Subprocess ====
>>> Exception in Tkinter callback
Traceback (most recent call last):
File "/Library/MGLTools/1.5.6rc1/lib/python2.5/lib-tk/Tkinter.py", line 1414, in __call__
return self.func(*args)
File "/Library/MGLTools/1.5.6rc1/MGLToolsPckgs/Pmv/msmsCommands.py", line 712, in guiCallback
if type(val['surfName']) is types.TupleType:
KeyError: 'surfName'